Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Vps28Q9D1C8 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.14□□□□□ -1.59
Vps28Q9D1C8 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm22194-201ENSMUST00000116869 95 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm14560-201ENSMUST00000118672 375 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm16254-201ENSMUST00000131528 730 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm5924-201ENSMUST00000132554 871 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm23965-201ENSMUST00000157969 142 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm16026-202ENSMUST00000159695 772 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Mir3090-201ENSMUST00000175597 87 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm27492-201ENSMUST00000185194 187 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm19086-201ENSMUST00000190772 665 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm9442-201ENSMUST00000194242 319 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm22897-201ENSMUST00000197860 128 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm44088-201ENSMUST00000204595 237 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm18127-201ENSMUST00000208479 725 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm5185-201ENSMUST00000080271 619 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Vps28Q9D1C8 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Fus-202ENSMUST00000079045 2623 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm12387-201ENSMUST00000118573 955 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm11790-201ENSMUST00000119569 455 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm24592-201ENSMUST00000122505 106 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm23546-201ENSMUST00000158211 137 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm22355-201ENSMUST00000175531 96 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm28769-201ENSMUST00000190176 615 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm38011-201ENSMUST00000193312 279 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm43418-201ENSMUST00000201334 428 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm43631-201ENSMUST00000202011 369 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm17987-201ENSMUST00000206902 603 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm6863-201ENSMUST00000052882 636 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm7204-201ENSMUST00000062591 600 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Vps28Q9D1C8 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms