Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm25447-201ENSMUST00000158997 128 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm18343-201ENSMUST00000172802 604 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm6055-201ENSMUST00000180532 378 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Mir7020-201ENSMUST00000183787 70 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm8282-201ENSMUST00000187559 483 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm19231-201ENSMUST00000193212 830 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 AC153646.1-201ENSMUST00000223229 1279 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm24919-201ENSMUST00000083020 106 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm22543-201ENSMUST00000104347 94 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm15018-201ENSMUST00000117090 633 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm15021-201ENSMUST00000117832 742 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm15959-201ENSMUST00000121724 368 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm22959-201ENSMUST00000122514 303 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm16571-201ENSMUST00000159112 291 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm3030-201ENSMUST00000163410 516 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm3339-201ENSMUST00000163462 475 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm7152-201ENSMUST00000163570 605 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm5258-201ENSMUST00000165437 327 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm3496-201ENSMUST00000188283 745 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm28437-201ENSMUST00000190277 783 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm38080-201ENSMUST00000194035 268 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm37308-201ENSMUST00000194684 100 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm36997-201ENSMUST00000195090 707 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm43489-201ENSMUST00000196810 993 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm44074-201ENSMUST00000204562 337 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm44779-201ENSMUST00000206937 708 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ccdc9Q8VC31 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm14854-201ENSMUST00000117758 841 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm11673-201ENSMUST00000117846 331 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm14906-201ENSMUST00000119265 390 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm16200-201ENSMUST00000120385 331 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm14875-201ENSMUST00000120881 319 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm11446-201ENSMUST00000121319 866 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm24628-201ENSMUST00000122761 289 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm25459-201ENSMUST00000157953 114 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm27024-201ENSMUST00000182561 755 ntBASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ccdc9Q8VC31 Gm28639-201ENSMUST00000191519 481 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms