Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm22272-201ENSMUST00000104039 134 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm22543-201ENSMUST00000104347 94 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm22940-201ENSMUST00000158560 155 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm15508-201ENSMUST00000160330 325 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm3025-201ENSMUST00000163454 489 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm3077-201ENSMUST00000165903 627 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm2878-201ENSMUST00000170173 486 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm6719-201ENSMUST00000202067 335 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Snord59a-201ENSMUST00000082844 74 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Gm22826-201ENSMUST00000083774 165 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rpp40Q8R1F9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm22778-201ENSMUST00000104090 128 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm14082-201ENSMUST00000118582 801 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm15120-201ENSMUST00000120602 301 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm12332-201ENSMUST00000121397 922 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm12041-201ENSMUST00000121606 602 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm26098-201ENSMUST00000157247 288 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm26034-201ENSMUST00000158154 116 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm25839-201ENSMUST00000158921 103 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm26993-201ENSMUST00000182766 789 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm29513-201ENSMUST00000185741 202 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm37659-201ENSMUST00000194574 111 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm43090-201ENSMUST00000202459 314 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm45608-201ENSMUST00000210948 389 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 AL589696.1-201ENSMUST00000225711 330 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm25140-201ENSMUST00000083254 140 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rpp40Q8R1F9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.13□□□□□ -1.59
Rpp40Q8R1F9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms