Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Mir346-201ENSMUST00000083547 98 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Gm23875-201ENSMUST00000083711 318 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Syne4Q8CII8 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Syne4Q8CII8 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.73□□□□□ -1.49
Syne4Q8CII8 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Syne4Q8CII8 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm12090-201ENSMUST00000118692 758 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm14991-201ENSMUST00000119913 598 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm15141-201ENSMUST00000121860 729 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm15885-201ENSMUST00000122114 388 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm11575-201ENSMUST00000122243 228 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm25913-201ENSMUST00000157617 135 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm22857-201ENSMUST00000174969 134 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm18802-201ENSMUST00000186270 888 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm37751-201ENSMUST00000192440 1198 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm17967-201ENSMUST00000195319 647 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm44402-201ENSMUST00000203677 238 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 CT573422.1-201ENSMUST00000216655 405 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.72□□□□□ -1.49
Syne4Q8CII8 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Syne4Q8CII8 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne4Q8CII8 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Syne4Q8CII8 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.71□□□□□ -1.49
Syne4Q8CII8 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Syne4Q8CII8 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Syne4Q8CII8 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne4Q8CII8 Gm25414-201ENSMUST00000101814 107 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm23014-201ENSMUST00000104144 130 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm2003-201ENSMUST00000118537 636 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm14688-201ENSMUST00000119169 303 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm11708-201ENSMUST00000119530 832 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm14301-201ENSMUST00000120181 324 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm1989-201ENSMUST00000126244 636 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm23069-201ENSMUST00000158240 311 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Mir5128-201ENSMUST00000175217 84 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm27688-201ENSMUST00000183634 91 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm18181-201ENSMUST00000190670 736 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm37213-201ENSMUST00000193077 586 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm38213-201ENSMUST00000193203 173 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm5309-201ENSMUST00000197416 677 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm44038-201ENSMUST00000203952 889 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm45034-201ENSMUST00000206831 482 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm18598-201ENSMUST00000207724 597 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 Gm44648-201ENSMUST00000208267 329 ntBASIC5.71□□□□□ -1.5
Syne4Q8CII8 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms