Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12237-201ENSMUST00000120158 470 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm13162-201ENSMUST00000121481 454 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm26034-201ENSMUST00000158154 116 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Mir6398-201ENSMUST00000184541 102 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm7128-201ENSMUST00000211639 533 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm24166-201ENSMUST00000082724 135 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Nup88Q8CEC0 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
Nup88Q8CEC0 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Nup88Q8CEC0 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.59□□□□□ -1.52
Nup88Q8CEC0 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.59□□□□□ -1.52
Nup88Q8CEC0 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm14229-201ENSMUST00000121178 850 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm25278-201ENSMUST00000157267 120 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm22726-201ENSMUST00000158089 179 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm9320-201ENSMUST00000184151 473 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm27690-201ENSMUST00000184596 126 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm4412-201ENSMUST00000186660 433 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm28097-201ENSMUST00000187333 366 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm7045-201ENSMUST00000221466 605 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm25005-201ENSMUST00000083812 156 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.58□□□□□ -1.52
Nup88Q8CEC0 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm14516-201ENSMUST00000120012 252 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Mir6926-201ENSMUST00000184562 68 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm44319-201ENSMUST00000196974 93 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm43136-201ENSMUST00000200403 636 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm45228-201ENSMUST00000206585 352 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC5.57□□□□□ -1.52
Nup88Q8CEC0 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms