Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm14784-201ENSMUST00000121604 663 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm24371-201ENSMUST00000122662 267 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm24239-201ENSMUST00000157791 255 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm43559-201ENSMUST00000198755 466 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm37283-201ENSMUST00000193111 1571 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm13550-201ENSMUST00000118185 525 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm14103-201ENSMUST00000119075 366 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm22588-201ENSMUST00000157510 140 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Mir5106-201ENSMUST00000174936 73 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm5284-201ENSMUST00000199053 903 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm45499-201ENSMUST00000211656 280 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm3213-201ENSMUST00000219296 441 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col6a6Q8C6K9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm43888-201ENSMUST00000204405 2587 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Mir551b-201ENSMUST00000102165 98 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm26300-201ENSMUST00000102282 94 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm15783-201ENSMUST00000117521 633 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm14282-201ENSMUST00000119484 240 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm19739-201ENSMUST00000195941 153 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 AL590503.1-201ENSMUST00000222053 321 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 AC187103.4-202ENSMUST00000225091 230 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 AC154838.1-201ENSMUST00000228944 911 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm15304-201ENSMUST00000122150 2640 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm24534-201ENSMUST00000157949 291 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm29664-201ENSMUST00000191125 463 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm35702-201ENSMUST00000198653 511 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Gm11360-201ENSMUST00000221898 262 ntBASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col6a6Q8C6K9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm22897-202ENSMUST00000197782 127 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC3.99□□□□□ -1.77
Col6a6Q8C6K9 AC125484.1-201ENSMUST00000223218 234 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms