Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir7012-201ENSMUST00000183900 64 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Mir6238-201ENSMUST00000184140 129 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm37866-201ENSMUST00000191950 696 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm42474-201ENSMUST00000201073 505 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Mir325-201ENSMUST00000083491 98 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Fbxw23-202ENSMUST00000198480 1388 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Ubfd1Q78JW9 Gm11912-201ENSMUST00000117235 264 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm14163-201ENSMUST00000117342 217 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm12422-201ENSMUST00000121431 302 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm28384-201ENSMUST00000189079 463 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm37219-201ENSMUST00000192036 926 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm44134-202ENSMUST00000204777 545 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm24763-201ENSMUST00000083688 190 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms