Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.1□□□□□ -1.43
Sh3rf1Q69ZI1 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44288-201ENSMUST00000205061 2795 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22370-201ENSMUST00000102422 83 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13193-201ENSMUST00000117275 225 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7189-201ENSMUST00000119811 429 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13788-201ENSMUST00000120767 601 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7855-201ENSMUST00000137737 687 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17223-201ENSMUST00000171413 481 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mir5107-201ENSMUST00000175586 88 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mup-ps7-201ENSMUST00000178292 545 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7094-201ENSMUST00000178379 366 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm23619-201ENSMUST00000178411 94 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mup-ps8-201ENSMUST00000178663 545 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mup-ps9-201ENSMUST00000178847 545 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm25474-201ENSMUST00000179052 94 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22047-201ENSMUST00000179176 94 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mup-ps6-201ENSMUST00000179564 545 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm6055-201ENSMUST00000180532 378 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29519-201ENSMUST00000186994 398 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17981-201ENSMUST00000191109 739 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44373-201ENSMUST00000196112 169 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44312-201ENSMUST00000203536 469 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7808-201ENSMUST00000082002 387 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm22126-201ENSMUST00000083244 142 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm21286-201ENSMUST00000098035 545 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.09□□□□□ -1.43
Sh3rf1Q69ZI1 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.09□□□□□ -1.44
Sh3rf1Q69ZI1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sh3rf1Q69ZI1 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.09□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Sh3rf1Q69ZI1 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm23739-201ENSMUST00000102295 108 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm13114-201ENSMUST00000117605 106 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm15901-201ENSMUST00000117663 941 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm12016-201ENSMUST00000119079 681 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm4853-201ENSMUST00000119359 394 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm12515-201ENSMUST00000120116 361 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm26169-201ENSMUST00000158420 135 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Gm3076-201ENSMUST00000161613 451 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sh3rf1Q69ZI1 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms