Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim28Q62318 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Gm23608-201ENSMUST00000104545 128 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm13502-201ENSMUST00000121574 684 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm3123-201ENSMUST00000163480 480 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim28Q62318 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim28Q62318 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Trim28Q62318 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim28Q62318 Gm4412-201ENSMUST00000186660 433 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm29086-201ENSMUST00000186774 222 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm29085-201ENSMUST00000187108 225 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm8498-201ENSMUST00000188227 974 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Gm19124-201ENSMUST00000191041 832 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm43144-201ENSMUST00000198256 485 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm35570-201ENSMUST00000198730 681 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim28Q62318 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim28Q62318 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim28Q62318 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim28Q62318 Gm24031-201ENSMUST00000083930 131 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm3978-201ENSMUST00000163406 2512 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.43□□□□□ -1.38
Trim28Q62318 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim28Q62318 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm44250-201ENSMUST00000203092 4229 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim28Q62318 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm37099-201ENSMUST00000191902 3451 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm24124-201ENSMUST00000104103 132 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim28Q62318 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm2288-201ENSMUST00000118560 638 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm12237-201ENSMUST00000120158 470 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm23429-201ENSMUST00000122486 149 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm17655-201ENSMUST00000167969 255 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm25534-201ENSMUST00000175365 125 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm6113-201ENSMUST00000180319 639 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm26828-201ENSMUST00000180640 172 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm27387-201ENSMUST00000184583 116 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm18698-201ENSMUST00000192327 668 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Trim28Q62318 AV026068-224ENSMUST00000224827 928 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Olfr192-201ENSMUST00000080251 925 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim28Q62318 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim28Q62318 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Trim28Q62318 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm38264-201ENSMUST00000194850 2032 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim28Q62318 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 Gm27013-202ENSMUST00000205067 1436 ntBASIC6.42□□□□□ -1.38
Trim28Q62318 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim28Q62318 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim28Q62318 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim28Q62318 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms