Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm44779-201ENSMUST00000206937 708 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm14369-201ENSMUST00000121355 285 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm25572-201ENSMUST00000157527 172 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm6650-201ENSMUST00000166710 614 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm8790-201ENSMUST00000194108 322 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm25592-201ENSMUST00000082635 131 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Mir551b-201ENSMUST00000102165 98 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm14067-201ENSMUST00000119340 314 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm20657-201ENSMUST00000177079 515 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm27940-201ENSMUST00000184449 98 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm28654-201ENSMUST00000189801 379 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm37828-201ENSMUST00000192496 432 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm43036-201ENSMUST00000200594 373 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm6261-201ENSMUST00000204707 760 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm18377-201ENSMUST00000215141 607 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm22601-201ENSMUST00000157595 250 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Mir6537-201ENSMUST00000184150 110 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm4734-201ENSMUST00000200117 777 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm22498-201ENSMUST00000104497 86 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm25290-201ENSMUST00000122796 144 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm34272-201ENSMUST00000208886 253 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Mir711-201ENSMUST00000102188 82 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm10444-201ENSMUST00000126708 148 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.24□□□□□ -1.57
Ccdc88aQ5SNZ0 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms