Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 AC124556.1-201ENSMUST00000218256 1319 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm42967-201ENSMUST00000198647 2312 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm14294-201ENSMUST00000119749 751 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm24731-201ENSMUST00000158227 131 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm17929-201ENSMUST00000186851 627 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm37746-201ENSMUST00000193249 198 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 AC134333.1-201ENSMUST00000204536 944 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm3442-201ENSMUST00000216808 710 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 AC117240.2-201ENSMUST00000220921 263 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Gm43707-201ENSMUST00000196451 3187 ntBASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trim41Q5NCC3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trim41Q5NCC3 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trim41Q5NCC3 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm18180-201ENSMUST00000187562 1484 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm23578-201ENSMUST00000103943 104 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm24338-201ENSMUST00000104205 127 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm11794-201ENSMUST00000119446 237 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm13170-201ENSMUST00000119716 643 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm9225-201ENSMUST00000121921 836 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm13077-201ENSMUST00000121941 484 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm15167-201ENSMUST00000121997 187 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm17086-201ENSMUST00000171346 484 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm20656-201ENSMUST00000176925 518 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm25451-201ENSMUST00000177832 121 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm24465-201ENSMUST00000178398 107 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm26731-201ENSMUST00000180683 543 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm27985-201ENSMUST00000185112 378 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm45724-201ENSMUST00000213031 420 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm5649-201ENSMUST00000217918 951 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 AC153924.1-201ENSMUST00000220117 312 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 AC154556.1-201ENSMUST00000224587 885 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 CT956049.1-201ENSMUST00000225671 763 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm5832-201ENSMUST00000121704 1582 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm37940-201ENSMUST00000194243 3251 ntBASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trim41Q5NCC3 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm15076-201ENSMUST00000117076 474 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm13331-201ENSMUST00000117500 448 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm11346-201ENSMUST00000118346 704 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm15364-201ENSMUST00000119618 585 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm14362-201ENSMUST00000121679 273 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm15840-201ENSMUST00000122099 943 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm15254-201ENSMUST00000149567 273 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm25013-201ENSMUST00000158402 128 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm16038-201ENSMUST00000159317 193 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms