Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm10145-201ENSMUST00000077776 462 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm26418-201ENSMUST00000104275 137 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm29031-201ENSMUST00000185316 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm29000-201ENSMUST00000185444 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm28204-201ENSMUST00000185934 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm28290-201ENSMUST00000186505 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm28161-201ENSMUST00000186669 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm28749-209ENSMUST00000189599 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm33163-201ENSMUST00000194504 614 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm43559-201ENSMUST00000198755 466 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.64□□□□□ -1.51
Shank3Q4ACU6 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm15014-201ENSMUST00000120742 258 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm5876-201ENSMUST00000203735 243 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm18877-201ENSMUST00000207706 539 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shank3Q4ACU6 Gm14282-201ENSMUST00000119484 240 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm22816-201ENSMUST00000157450 117 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm27037-201ENSMUST00000182270 960 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm37682-201ENSMUST00000191776 522 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm5265-201ENSMUST00000076828 342 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm25764-201ENSMUST00000104092 134 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm6754-201ENSMUST00000117124 913 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm14621-201ENSMUST00000117709 689 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm23782-201ENSMUST00000157939 120 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm4134-201ENSMUST00000173244 563 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm22120-201ENSMUST00000175590 70 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm9245-201ENSMUST00000200528 983 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shank3Q4ACU6 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms