Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm14876-201ENSMUST00000120795 327 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm16545-201ENSMUST00000161968 463 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm29332-201ENSMUST00000190829 227 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm6546-201ENSMUST00000192096 766 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm18150-201ENSMUST00000195341 645 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm19596-201ENSMUST00000203685 739 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm3816-201ENSMUST00000209803 433 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trafd1Q3UDK1 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm12062-201ENSMUST00000117533 259 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm8145-201ENSMUST00000118220 745 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm24774-201ENSMUST00000157384 134 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm29356-201ENSMUST00000186935 373 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm37629-201ENSMUST00000193635 1050 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm29793-201ENSMUST00000202874 460 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm43895-201ENSMUST00000203219 855 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm45157-201ENSMUST00000208729 401 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm45610-201ENSMUST00000209227 784 ntBASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm26098-201ENSMUST00000157247 288 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm22226-201ENSMUST00000157355 109 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm7281-201ENSMUST00000160010 543 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm26950-201ENSMUST00000182734 498 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm37319-201ENSMUST00000193500 636 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm19080-201ENSMUST00000196082 550 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm43304-201ENSMUST00000196803 326 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm46191-201ENSMUST00000218899 433 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm25147-201ENSMUST00000083030 105 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms