Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Trim43aQ3TL54 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm12062-201ENSMUST00000117533 259 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm11759-201ENSMUST00000121742 464 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm23700-201ENSMUST00000158842 102 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm29475-201ENSMUST00000190767 312 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm37636-201ENSMUST00000193583 359 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm37095-201ENSMUST00000195421 205 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm43418-201ENSMUST00000201334 428 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Snord15b-201ENSMUST00000083032 145 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.91□□□□□ -1.62
Trim43aQ3TL54 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim43aQ3TL54 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.9□□□□□ -1.62
Trim43aQ3TL54 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trim43aQ3TL54 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.9□□□□□ -1.62
Trim43aQ3TL54 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim43aQ3TL54 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm14107-201ENSMUST00000117774 330 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm14603-201ENSMUST00000121275 448 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm11909-201ENSMUST00000121424 759 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm22514-201ENSMUST00000122547 308 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm2182-201ENSMUST00000145243 663 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm24675-201ENSMUST00000158757 259 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm16545-201ENSMUST00000161968 463 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm6647-201ENSMUST00000170514 641 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm24561-201ENSMUST00000175182 95 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm9320-201ENSMUST00000184151 473 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm28097-201ENSMUST00000187333 366 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm28116-201ENSMUST00000189064 387 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm45789-201ENSMUST00000213038 364 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm7439-201ENSMUST00000214053 835 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm23796-201ENSMUST00000084011 160 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim43aQ3TL54 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trim43aQ3TL54 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm23879-201ENSMUST00000116874 126 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm11893-201ENSMUST00000117829 491 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm12311-201ENSMUST00000118803 374 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm26312-201ENSMUST00000157769 165 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm22968-201ENSMUST00000157955 118 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm3531-201ENSMUST00000162698 489 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Gm22859-201ENSMUST00000174978 122 ntBASIC4.89□□□□□ -1.63
Trim43aQ3TL54 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms