Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 Gm43884-201ENSMUST00000204251 559 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm2607-201ENSMUST00000212389 627 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox9Q04887 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sox9Q04887 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Sox9Q04887 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.85□□□□□ -1.47
Sox9Q04887 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.85□□□□□ -1.47
Sox9Q04887 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sox9Q04887 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm11561-201ENSMUST00000117429 417 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm14881-201ENSMUST00000120366 372 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm16345-201ENSMUST00000146065 158 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm23171-201ENSMUST00000157159 264 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm22789-201ENSMUST00000157884 130 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm24498-201ENSMUST00000158445 102 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm7346-201ENSMUST00000169661 476 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm19898-201ENSMUST00000177490 251 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm19206-201ENSMUST00000186401 827 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm34176-201ENSMUST00000192621 474 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox9Q04887 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm43708-201ENSMUST00000198857 961 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm44449-201ENSMUST00000203610 153 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm29781-201ENSMUST00000203862 478 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm19761-201ENSMUST00000205372 391 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Sox9Q04887 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Sox9Q04887 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox9Q04887 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox9Q04887 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.84□□□□□ -1.47
Sox9Q04887 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox9Q04887 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox9Q04887 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sox9Q04887 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sox9Q04887 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Sox9Q04887 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sox9Q04887 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.84□□□□□ -1.48
Sox9Q04887 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Sox9Q04887 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox9Q04887 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm15001-201ENSMUST00000117657 795 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm12328-201ENSMUST00000118611 197 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm3267-201ENSMUST00000118671 473 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm12448-201ENSMUST00000118852 655 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms