Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm43350-201ENSMUST00000196382 711 ntBASIC5.3□□□□□ -1.56
CiitaP79621 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Gm43794-201ENSMUST00000200971 692 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm44402-201ENSMUST00000203677 238 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CiitaP79621 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.3□□□□□ -1.56
CiitaP79621 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.3□□□□□ -1.56
CiitaP79621 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Snora52-201ENSMUST00000082732 137 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CiitaP79621 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CiitaP79621 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CiitaP79621 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CiitaP79621 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CiitaP79621 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CiitaP79621 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Gm13250-201ENSMUST00000117209 753 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.29□□□□□ -1.56
CiitaP79621 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Gm24931-201ENSMUST00000158324 107 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm24944-201ENSMUST00000158330 128 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm23046-201ENSMUST00000158369 284 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm23115-201ENSMUST00000158480 108 ntBASIC5.29□□□□□ -1.56
CiitaP79621 S100a11-ps-201ENSMUST00000181735 306 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Mir6344-201ENSMUST00000183462 104 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm29148-201ENSMUST00000188140 336 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.29□□□□□ -1.56
CiitaP79621 Gm34224-201ENSMUST00000204606 364 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm19761-201ENSMUST00000205372 391 ntBASIC5.29□□□□□ -1.56
CiitaP79621 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.29□□□□□ -1.56
CiitaP79621 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
CiitaP79621 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
CiitaP79621 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CiitaP79621 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CiitaP79621 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CiitaP79621 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CiitaP79621 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CiitaP79621 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CiitaP79621 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CiitaP79621 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CiitaP79621 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm16394-201ENSMUST00000117289 675 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm14706-201ENSMUST00000117744 255 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm16106-201ENSMUST00000119187 294 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm11631-201ENSMUST00000119220 156 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm12577-201ENSMUST00000119701 574 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm14655-201ENSMUST00000120124 578 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm15168-201ENSMUST00000121057 316 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.28□□□□□ -1.56
CiitaP79621 Gm5353-201ENSMUST00000139800 793 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.28□□□□□ -1.56
CiitaP79621 Trbv10-201ENSMUST00000168322 289 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm8614-201ENSMUST00000182528 978 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.28□□□□□ -1.56
CiitaP79621 Gm6546-201ENSMUST00000192096 766 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm31532-201ENSMUST00000203555 767 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.28□□□□□ -1.56
CiitaP79621 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.28□□□□□ -1.56
CiitaP79621 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.28□□□□□ -1.56
CiitaP79621 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms