Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13890-201ENSMUST00000117578 390 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm12067-201ENSMUST00000119755 1148 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm11679-201ENSMUST00000121830 779 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm12368-201ENSMUST00000122251 434 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.91□□□□□ -1.3
Rfx1P48377 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm28596-201ENSMUST00000185870 696 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC6.91□□□□□ -1.3
Rfx1P48377 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Rfx1P48377 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm19029-201ENSMUST00000189923 564 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm32295-201ENSMUST00000192558 696 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm36998-201ENSMUST00000193205 704 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm31260-201ENSMUST00000193478 696 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm43370-201ENSMUST00000196437 284 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm43892-201ENSMUST00000204373 265 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.91□□□□□ -1.3
Rfx1P48377 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm6362-201ENSMUST00000217686 836 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 AC101677.1-201ENSMUST00000218590 158 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm10095-201ENSMUST00000222765 483 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm4963-201ENSMUST00000072718 378 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm26442-201ENSMUST00000082588 153 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Rfx1P48377 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.91□□□□□ -1.3
Rfx1P48377 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Rfx1P48377 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Rfx1P48377 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Rfx1P48377 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm24715-201ENSMUST00000102377 95 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm23424-201ENSMUST00000103889 110 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm14575-201ENSMUST00000117210 560 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm11781-201ENSMUST00000118328 472 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm12268-201ENSMUST00000118398 442 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm11447-201ENSMUST00000118983 858 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm8430-201ENSMUST00000119780 471 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm11522-201ENSMUST00000120533 176 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm7494-201ENSMUST00000121248 441 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Rfx1P48377 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Rfx1P48377 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Fth-ps2-201ENSMUST00000168364 516 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Rfx1P48377 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Rfx1P48377 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Rfx1P48377 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Rfx1P48377 Mir496b-201ENSMUST00000184935 113 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm37135-201ENSMUST00000192652 534 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC6.9□□□□□ -1.3
Rfx1P48377 Gm44673-201ENSMUST00000205692 996 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.9□□□□□ -1.3
Rfx1P48377 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.9□□□□□ -1.3
Rfx1P48377 AC160931.2-201ENSMUST00000221445 351 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Rfx1P48377 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 AC154806.4-201ENSMUST00000227406 439 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Rfx1P48377 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm25699-201ENSMUST00000082896 167 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Gm24029-201ENSMUST00000083928 143 ntBASIC6.9□□□□□ -1.3
Rfx1P48377 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Rfx1P48377 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.9□□□□□ -1.31
Rfx1P48377 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Rfx1P48377 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Rfx1P48377 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Rfx1P48377 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms