Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdx2P43241 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Mir1193-201ENSMUST00000116761 121 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm14659-201ENSMUST00000117667 843 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm15058-201ENSMUST00000117689 458 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm15034-201ENSMUST00000120043 349 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm14303-201ENSMUST00000121320 171 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm24939-201ENSMUST00000158325 137 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm22243-201ENSMUST00000178754 120 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm18828-202ENSMUST00000181035 310 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm8069-201ENSMUST00000197887 154 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm43315-201ENSMUST00000198120 313 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Synpr-207ENSMUST00000223583 3362 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdx2P43241 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdx2P43241 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdx2P43241 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.42□□□□□ -1.7
Cdx2P43241 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm11631-201ENSMUST00000119220 156 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm24745-201ENSMUST00000157840 85 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm24402-201ENSMUST00000157873 91 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm25264-201ENSMUST00000158519 117 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm27165-201ENSMUST00000183951 232 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm42830-201ENSMUST00000196642 313 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm19201-201ENSMUST00000210127 778 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Gm8556-201ENSMUST00000210437 664 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm31931-201ENSMUST00000219666 222 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx2P43241 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm25134-201ENSMUST00000082646 160 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx2P43241 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Cdx2P43241 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.41□□□□□ -1.7
Cdx2P43241 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdx2P43241 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.4□□□□□ -1.7
Cdx2P43241 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdx2P43241 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Cdx2P43241 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdx2P43241 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.4□□□□□ -1.7
Cdx2P43241 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdx2P43241 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdx2P43241 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm14122-201ENSMUST00000122076 973 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdx2P43241 Gm19807-201ENSMUST00000173971 667 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm13249-201ENSMUST00000177803 345 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm13144-201ENSMUST00000179385 345 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm6802-202ENSMUST00000186566 126 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm18183-201ENSMUST00000191024 615 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdx2P43241 Gm43015-201ENSMUST00000199087 565 ntBASIC4.4□□□□□ -1.71
Cdx2P43241 Gm18330-201ENSMUST00000199246 547 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms