Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Traf1P39428 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Mir676-201ENSMUST00000102443 89 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm15227-201ENSMUST00000121844 399 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm23046-201ENSMUST00000158369 284 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Mir6418-201ENSMUST00000185075 115 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm9569-201ENSMUST00000187492 787 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm18426-201ENSMUST00000191874 973 ntBASIC5.66□□□□□ -1.5
Traf1P39428 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gm43350-201ENSMUST00000196382 711 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.66□□□□□ -1.5
Traf1P39428 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm45171-201ENSMUST00000206360 736 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm6230-201ENSMUST00000208077 780 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Traf1P39428 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm22350-201ENSMUST00000083924 156 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.66□□□□□ -1.5
Traf1P39428 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.66□□□□□ -1.5
Traf1P39428 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Traf1P39428 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Traf1P39428 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Traf1P39428 Gm14621-201ENSMUST00000117709 689 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm12988-201ENSMUST00000119054 478 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.65□□□□□ -1.5
Traf1P39428 Gm24931-201ENSMUST00000158324 107 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm29588-201ENSMUST00000185738 298 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.65□□□□□ -1.5
Traf1P39428 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm6719-201ENSMUST00000202067 335 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm44402-201ENSMUST00000203677 238 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.65□□□□□ -1.5
Traf1P39428 Gm20586-201ENSMUST00000210122 547 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.5
Traf1P39428 Gm7045-201ENSMUST00000221466 605 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm17915-201ENSMUST00000222077 548 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm25005-201ENSMUST00000083812 156 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Gm10794-201ENSMUST00000099624 207 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.65□□□□□ -1.5
Traf1P39428 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Traf1P39428 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.65□□□□□ -1.51
Traf1P39428 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Traf1P39428 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Traf1P39428 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Traf1P39428 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.65□□□□□ -1.51
Traf1P39428 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.65□□□□□ -1.51
Traf1P39428 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Traf1P39428 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Traf1P39428 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm11584-201ENSMUST00000120636 325 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Gm5353-201ENSMUST00000139800 793 ntBASIC5.64□□□□□ -1.51
Traf1P39428 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm5558-201ENSMUST00000178933 495 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Gm28118-201ENSMUST00000185957 294 ntBASIC5.64□□□□□ -1.51
Traf1P39428 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Gm20239-201ENSMUST00000196610 982 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Gm44237-201ENSMUST00000205183 936 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Gm45701-201ENSMUST00000212049 235 ntBASIC5.64□□□□□ -1.51
Traf1P39428 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Traf1P39428 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm25818-201ENSMUST00000083282 164 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms