Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm26107-201ENSMUST00000083972 107 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC6.77□□□□□ -1.33
Col18a1P39061 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col18a1P39061 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm25808-201ENSMUST00000122784 284 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm22637-201ENSMUST00000158144 283 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm21617-201ENSMUST00000188297 691 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm29489-201ENSMUST00000188934 324 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 AC154296.3-201ENSMUST00000214427 712 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col18a1P39061 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 AC133189.2-201ENSMUST00000228527 392 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Col18a1P39061 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm24150-201ENSMUST00000082759 104 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm24522-201ENSMUST00000083964 108 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Col18a1P39061 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC6.76□□□□□ -1.33
Col18a1P39061 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col18a1P39061 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm45697-201ENSMUST00000212893 2876 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm37143-201ENSMUST00000195180 3259 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm12852-201ENSMUST00000119478 719 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm22804-201ENSMUST00000158052 101 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm3102-201ENSMUST00000164236 489 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm17064-201ENSMUST00000167690 452 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Samd15-201ENSMUST00000169669 1194 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC6.76□□□□□ -1.33
Col18a1P39061 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm27976-201ENSMUST00000183635 162 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm29592-201ENSMUST00000189434 370 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm43227-201ENSMUST00000202239 677 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm44234-201ENSMUST00000204246 900 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm9472-201ENSMUST00000221625 526 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 AC192334.2-201ENSMUST00000223087 1091 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col18a1P39061 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Col18a1P39061 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Col18a1P39061 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col18a1P39061 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col18a1P39061 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.76□□□□□ -1.33
Col18a1P39061 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm14932-201ENSMUST00000117112 453 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm22158-201ENSMUST00000158411 126 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm22836-201ENSMUST00000158441 61 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Col18a1P39061 Mir7022-201ENSMUST00000183749 61 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.75□□□□□ -1.33
Col18a1P39061 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm28414-201ENSMUST00000190111 294 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm46103-201ENSMUST00000217614 341 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm4921-201ENSMUST00000219804 992 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms