Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm25965-201ENSMUST00000157170 93 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Gm24636-201ENSMUST00000158673 288 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm27158-201ENSMUST00000183813 238 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm5338-201ENSMUST00000209530 639 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Col2a1P28481 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col2a1P28481 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.12□□□□□ -1.59
Col2a1P28481 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col2a1P28481 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
Col2a1P28481 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col2a1P28481 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col2a1P28481 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col2a1P28481 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col2a1P28481 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col2a1P28481 Snora64-201ENSMUST00000104521 134 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Mir105-201ENSMUST00000104655 80 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Gm28304-201ENSMUST00000185977 312 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 Gm29256-201ENSMUST00000189094 312 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 Gm28484-201ENSMUST00000190606 312 ntBASIC5.11□□□□□ -1.59
Col2a1P28481 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col2a1P28481 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col2a1P28481 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Gm15426-201ENSMUST00000117823 556 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm16545-201ENSMUST00000161968 463 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm37050-201ENSMUST00000193464 466 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Gm43895-201ENSMUST00000203219 855 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm25821-201ENSMUST00000093657 133 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Col2a1P28481 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Col2a1P28481 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
Col2a1P28481 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.1□□□□□ -1.59
Col2a1P28481 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col2a1P28481 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col2a1P28481 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col2a1P28481 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm15076-201ENSMUST00000117076 474 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Gm6584-201ENSMUST00000119671 447 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Gm8200-201ENSMUST00000122390 222 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col2a1P28481 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm44354-201ENSMUST00000196017 143 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.09□□□□□ -1.59
Col2a1P28481 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.09□□□□□ -1.59
Col2a1P28481 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.09□□□□□ -1.59
Col2a1P28481 AC132384.5-201ENSMUST00000218562 226 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Col2a1P28481 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.09□□□□□ -1.59
Col2a1P28481 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms