Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sdc1P18828 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm7206-201ENSMUST00000117730 508 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm13333-201ENSMUST00000119424 781 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm15530-201ENSMUST00000122206 555 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm24731-201ENSMUST00000158227 131 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm25865-201ENSMUST00000158247 104 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm23408-201ENSMUST00000158523 265 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm17159-201ENSMUST00000169043 482 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm17153-201ENSMUST00000171314 490 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm5288-201ENSMUST00000198323 1119 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm44869-201ENSMUST00000208836 357 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sdc1P18828 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 AC238676.3-201ENSMUST00000223042 154 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Diaph3-206ENSMUST00000226745 713 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 AC160120.1-201ENSMUST00000227446 663 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 n-R5s215-201ENSMUST00000082480 104 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sdc1P18828 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sdc1P18828 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sdc1P18828 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Sdc1P18828 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Sdc1P18828 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.79□□□□□ -1.8
Sdc1P18828 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Sdc1P18828 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 AC187103.2-201ENSMUST00000223605 1617 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Sdc1P18828 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm12230-201ENSMUST00000118301 454 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm12577-201ENSMUST00000119701 574 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm14805-201ENSMUST00000120172 340 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm14649-201ENSMUST00000121814 324 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Llph-ps2-201ENSMUST00000122000 393 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm26372-201ENSMUST00000157831 236 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm23224-201ENSMUST00000158122 271 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm8221-201ENSMUST00000178052 564 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Mir6361-201ENSMUST00000185079 101 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm34768-201ENSMUST00000193884 565 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms