Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.01□□□□□ -1.77
Cdx1P18111 Gm44523-201ENSMUST00000205616 417 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Gm44603-201ENSMUST00000206820 367 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Gm3257-201ENSMUST00000207217 675 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Gm45660-201ENSMUST00000210267 151 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx1P18111 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cdx1P18111 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cdx1P18111 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx1P18111 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Cdx1P18111 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
Cdx1P18111 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx1P18111 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx1P18111 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.01□□□□□ -1.77
Cdx1P18111 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Cdx1P18111 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Cdx1P18111 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Gm5925-201ENSMUST00000105016 1497 ntBASIC4□□□□□ -1.77
Cdx1P18111 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm42923-201ENSMUST00000198438 2896 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm23193-201ENSMUST00000102427 82 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Gm23839-201ENSMUST00000116957 109 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm12231-201ENSMUST00000119447 695 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm13687-201ENSMUST00000119857 282 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm13000-201ENSMUST00000120937 496 ntBASIC4□□□□□ -1.77
Cdx1P18111 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4□□□□□ -1.77
Cdx1P18111 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4□□□□□ -1.77
Cdx1P18111 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4□□□□□ -1.77
Cdx1P18111 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4□□□□□ -1.77
Cdx1P18111 Gm23585-201ENSMUST00000157656 102 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm26373-201ENSMUST00000157833 103 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm23965-201ENSMUST00000157969 142 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm16134-201ENSMUST00000161714 336 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm8358-201ENSMUST00000167222 555 ntBASIC4□□□□□ -1.77
Cdx1P18111 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4□□□□□ -1.77
Cdx1P18111 Gm37973-201ENSMUST00000195767 1289 ntBASIC4□□□□□ -1.77
Cdx1P18111 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4□□□□□ -1.77
Cdx1P18111 Mir1892-201ENSMUST00000197752 80 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm44412-201ENSMUST00000203018 294 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC4□□□□□ -1.77
Cdx1P18111 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm45474-201ENSMUST00000209471 408 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx1P18111 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4□□□□□ -1.77
Cdx1P18111 Gm40692-201ENSMUST00000220411 491 ntBASIC4□□□□□ -1.77
Cdx1P18111 AC238676.3-201ENSMUST00000223042 154 ntBASIC4□□□□□ -1.77
Cdx1P18111 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx1P18111 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx1P18111 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx1P18111 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4□□□□□ -1.77
Cdx1P18111 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 CT025556.1-201ENSMUST00000222965 1884 ntBASIC4□□□□□ -1.77
Cdx1P18111 Smc5-206ENSMUST00000226111 3265 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm43605-201ENSMUST00000199663 3426 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm38235-201ENSMUST00000194600 4952 ntBASIC4□□□□□ -1.77
Cdx1P18111 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Cdx1P18111 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Cdx1P18111 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm38253-201ENSMUST00000194058 4678 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 AC132852.1-201ENSMUST00000214683 2324 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm13928-201ENSMUST00000120326 1732 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm43843-201ENSMUST00000202396 1587 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Mir193b-201ENSMUST00000103784 79 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm7079-201ENSMUST00000119726 171 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm15803-201ENSMUST00000120118 394 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm11825-201ENSMUST00000120710 736 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm11805-201ENSMUST00000121238 600 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm11965-201ENSMUST00000122017 277 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm23467-201ENSMUST00000157127 159 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm25430-201ENSMUST00000157614 289 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm22312-201ENSMUST00000158005 130 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdx1P18111 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms