Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Herc1E9PZP8 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm37766-201ENSMUST00000192244 2567 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm12125-201ENSMUST00000117261 736 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm26490-201ENSMUST00000157879 140 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm20549-201ENSMUST00000174804 429 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC2.54□□□□□ -2
Herc1E9PZP8 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm28594-201ENSMUST00000187022 661 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Mir194-1-201ENSMUST00000083647 67 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC2.54□□□□□ -2
Herc1E9PZP8 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm23709-201ENSMUST00000104364 130 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Gm25105-201ENSMUST00000122477 130 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm8674-201ENSMUST00000179367 3047 ntBASIC2.54□□□□□ -2
Herc1E9PZP8 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Herc1E9PZP8 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC2.54□□□□□ -2
Herc1E9PZP8 Gm12413-201ENSMUST00000121508 312 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 n-R5s98-201ENSMUST00000122549 119 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC2.53□□□□□ -2
Herc1E9PZP8 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm6104-201ENSMUST00000078030 603 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC2.53□□□□□ -2
Herc1E9PZP8 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm37342-201ENSMUST00000194588 4965 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm37868-201ENSMUST00000195578 2735 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm44242-201ENSMUST00000204212 2721 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm23133-201ENSMUST00000104255 135 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm12001-201ENSMUST00000121727 913 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm26350-201ENSMUST00000157531 288 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm21045-201ENSMUST00000183058 1020 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 AC130661.1-201ENSMUST00000218248 1680 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC2.53□□□□□ -2
Herc1E9PZP8 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Herc1E9PZP8 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm37779-201ENSMUST00000194221 3380 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC2.53□□□□□ -2
Herc1E9PZP8 Gm14706-201ENSMUST00000117744 255 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC2.53□□□□□ -2
Herc1E9PZP8 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Trbv9-201ENSMUST00000194494 290 ntBASIC2.53□□□□□ -2
Herc1E9PZP8 Gm43828-201ENSMUST00000196890 639 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms