Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm4045-201ENSMUST00000204076 310 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm7363-201ENSMUST00000119883 399 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm6062-201ENSMUST00000120462 631 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm11506-201ENSMUST00000122414 470 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm5258-201ENSMUST00000165437 327 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm16378-201ENSMUST00000179168 342 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm29228-201ENSMUST00000185489 418 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm35702-201ENSMUST00000198653 511 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 CT009765.2-201ENSMUST00000221331 392 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm10540-201ENSMUST00000097581 276 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm27695-201ENSMUST00000184301 91 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm46998-201ENSMUST00000221444 330 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Scn3aA2ASI5 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Scn3aA2ASI5 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Scn3aA2ASI5 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm25965-201ENSMUST00000157170 93 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm22789-201ENSMUST00000157884 130 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm44370-201ENSMUST00000175436 112 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scn3aA2ASI5 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm23496-201ENSMUST00000157741 248 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Mir5106-201ENSMUST00000174936 73 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Mir5134-201ENSMUST00000175529 78 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm37272-201ENSMUST00000193401 488 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm44354-201ENSMUST00000196017 143 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm43037-201ENSMUST00000196808 250 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm23927-201ENSMUST00000082466 215 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms