Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm3362-201ENSMUST00000148102 466 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm26490-201ENSMUST00000157879 140 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm6647-201ENSMUST00000170514 641 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm28974-201ENSMUST00000187893 231 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm29148-201ENSMUST00000188140 336 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm38166-201ENSMUST00000191660 471 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Mir5121-201ENSMUST00000198528 74 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm8264-201ENSMUST00000217801 465 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm8158-201ENSMUST00000219220 465 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm8112-201ENSMUST00000219637 465 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.4□□□□□ -1.55
Smc1aQ9CU62 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
Smc1aQ9CU62 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm19791-201ENSMUST00000180398 859 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm6075-201ENSMUST00000186816 486 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm2497-201ENSMUST00000189539 601 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm29552-201ENSMUST00000190548 660 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm18445-201ENSMUST00000195502 774 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm45171-201ENSMUST00000206360 736 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm20074-201ENSMUST00000208144 484 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm3213-201ENSMUST00000219296 441 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm25260-201ENSMUST00000083053 134 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Mir20a-201ENSMUST00000083508 107 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Smc1aQ9CU62 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.39□□□□□ -1.55
Smc1aQ9CU62 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm16149-201ENSMUST00000117631 309 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm14082-201ENSMUST00000118582 801 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm14352-201ENSMUST00000119250 449 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm25278-201ENSMUST00000157267 120 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm24217-201ENSMUST00000158260 133 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm27688-201ENSMUST00000183634 91 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm9443-201ENSMUST00000188406 816 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm43309-201ENSMUST00000200837 458 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm44038-201ENSMUST00000203952 889 ntBASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Smc1aQ9CU62 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms