Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm19637-201ENSMUST00000185933 579 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm7142-201ENSMUST00000194232 586 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm23925-201ENSMUST00000082471 132 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm43314-201ENSMUST00000196744 2231 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm23532-201ENSMUST00000104569 112 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm12885-201ENSMUST00000122246 328 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm7241-201ENSMUST00000159853 357 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm9775-201ENSMUST00000189402 331 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm38098-201ENSMUST00000194115 241 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm44946-201ENSMUST00000208425 572 ntBASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Cdh23Q99PF4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm43028-201ENSMUST00000202561 481 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm45420-201ENSMUST00000211243 425 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm45344-201ENSMUST00000211610 341 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdh23Q99PF4 Gm28359-201ENSMUST00000187470 1322 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm25407-201ENSMUST00000104102 134 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm25272-201ENSMUST00000104293 128 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm12103-201ENSMUST00000121892 362 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm43855-201ENSMUST00000197462 507 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 BC023105-201ENSMUST00000073997 1227 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm17109-201ENSMUST00000163985 358 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr895-201ENSMUST00000093864 951 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm37001-201ENSMUST00000193377 190 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.39□□□□□ -1.71
Cdh23Q99PF4 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdh23Q99PF4 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdh23Q99PF4 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Cdh23Q99PF4 Gm11313-201ENSMUST00000118779 432 ntBASIC4.38□□□□□ -1.71
Cdh23Q99PF4 Mir1934-201ENSMUST00000158127 83 ntBASIC4.38□□□□□ -1.71
Cdh23Q99PF4 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms