Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm14512-201ENSMUST00000117924 230 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm13137-201ENSMUST00000118035 345 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm15060-201ENSMUST00000119550 948 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm2768-201ENSMUST00000121062 250 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm16428-201ENSMUST00000121193 723 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm12396-201ENSMUST00000121600 306 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm20549-201ENSMUST00000174804 429 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm27887-201ENSMUST00000184367 102 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Mir496b-201ENSMUST00000184935 113 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm38015-201ENSMUST00000193048 188 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm43472-201ENSMUST00000200175 154 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm42850-201ENSMUST00000202094 201 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm7832-201ENSMUST00000202613 880 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm43892-201ENSMUST00000204373 265 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm19441-201ENSMUST00000221545 330 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm18413-201ENSMUST00000221573 655 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm28392-201ENSMUST00000077630 393 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm23614-201ENSMUST00000082598 107 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm23502-201ENSMUST00000083902 145 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.72□□□□□ -1.49
Nkx6-1Q99MA9 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nkx6-1Q99MA9 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm12308-201ENSMUST00000120440 389 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm11438-201ENSMUST00000121582 189 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm15335-201ENSMUST00000122442 411 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Mir1970-201ENSMUST00000157839 104 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Mir3080-201ENSMUST00000175010 79 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm24081-201ENSMUST00000175177 125 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm25873-201ENSMUST00000180317 107 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Mir7028-201ENSMUST00000185016 64 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm18802-201ENSMUST00000186270 888 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm29454-201ENSMUST00000190805 393 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm9710-201ENSMUST00000198053 499 ntBASIC5.71□□□□□ -1.5
Nkx6-1Q99MA9 Gm43513-201ENSMUST00000199779 1076 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms