Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Gm17811-201ENSMUST00000206193 387 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lsm1Q8VC85 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm12465-201ENSMUST00000118591 300 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm14725-201ENSMUST00000120324 828 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm13232-201ENSMUST00000121816 632 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm6647-201ENSMUST00000170514 641 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm27036-201ENSMUST00000182465 980 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm28500-201ENSMUST00000190286 151 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Lsm1Q8VC85 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm6650-201ENSMUST00000166710 614 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm17159-201ENSMUST00000169043 482 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm5066-201ENSMUST00000188479 822 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm3145-201ENSMUST00000188584 220 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm37636-201ENSMUST00000193583 359 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm44402-201ENSMUST00000203677 238 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm44038-201ENSMUST00000203952 889 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm18409-202ENSMUST00000220105 529 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
Lsm1Q8VC85 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.49□□□□□ -1.69
Lsm1Q8VC85 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms