Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 Gm42852-201ENSMUST00000202649 1379 ntBASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Ccdc9Q8VC31 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm14586-201ENSMUST00000119571 408 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm6542-201ENSMUST00000153606 772 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm23225-201ENSMUST00000158121 114 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm24957-201ENSMUST00000179604 132 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm37272-201ENSMUST00000193401 488 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm20786-201ENSMUST00000212649 436 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm45710-201ENSMUST00000212847 215 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm19174-201ENSMUST00000216944 956 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm22423-201ENSMUST00000082861 184 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Mir143-201ENSMUST00000083511 63 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm10221-201ENSMUST00000088299 309 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Gm44742-201ENSMUST00000207190 1412 ntBASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Ccdc9Q8VC31 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm37862-201ENSMUST00000193079 2533 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm44682-201ENSMUST00000208501 2614 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm22370-201ENSMUST00000102422 83 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm22372-201ENSMUST00000104589 136 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm11908-201ENSMUST00000117755 347 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm15754-201ENSMUST00000119191 478 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm8051-201ENSMUST00000120464 466 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm23280-201ENSMUST00000157905 139 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm3307-201ENSMUST00000176164 632 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm38181-201ENSMUST00000181357 720 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm18356-201ENSMUST00000185677 623 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm28648-201ENSMUST00000190092 343 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm2429-201ENSMUST00000194635 586 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm43973-201ENSMUST00000203562 210 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Mir298-201ENSMUST00000083476 82 ntBASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Ccdc9Q8VC31 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Ccdc9Q8VC31 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.9□□□□□ -1.47
Ccdc9Q8VC31 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Ccdc9Q8VC31 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 AC124346.2-201ENSMUST00000217986 5083 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm11409-201ENSMUST00000118621 403 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ccdc9Q8VC31 Gm25433-201ENSMUST00000158283 286 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms