Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Gm44816-201ENSMUST00000206666 477 ntBASIC5□□□□□ -1.61
Prpf39Q8K2Z2 AC154730.1-201ENSMUST00000227874 816 ntBASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Mir338-201ENSMUST00000083666 98 ntBASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf39Q8K2Z2 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm14786-201ENSMUST00000117127 944 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm14512-201ENSMUST00000117924 230 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm12041-201ENSMUST00000121606 602 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm12893-201ENSMUST00000121732 275 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm25103-201ENSMUST00000122671 318 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm22764-201ENSMUST00000158370 92 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm25714-201ENSMUST00000158626 296 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Mir6994-201ENSMUST00000198985 73 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm26072-201ENSMUST00000083135 107 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Prpf39Q8K2Z2 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm13162-201ENSMUST00000121481 454 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm11759-201ENSMUST00000121742 464 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm3531-201ENSMUST00000162698 489 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Mir7020-201ENSMUST00000183787 70 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm28389-201ENSMUST00000190090 697 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm37682-201ENSMUST00000191776 522 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm37908-201ENSMUST00000195828 470 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf39Q8K2Z2 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf39Q8K2Z2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms