Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Brf1Q8CFK2 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm13172-201ENSMUST00000118685 256 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm25389-201ENSMUST00000157340 286 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm22725-201ENSMUST00000158092 110 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm23115-201ENSMUST00000158480 108 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm26404-201ENSMUST00000158498 109 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm28639-201ENSMUST00000191519 481 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm40692-201ENSMUST00000220411 491 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 AC154305.3-201ENSMUST00000224661 552 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 AC241593.2-201ENSMUST00000225099 510 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm4963-201ENSMUST00000072718 378 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm24207-201ENSMUST00000082781 108 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.11□□□□□ -1.43
Brf1Q8CFK2 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm8051-201ENSMUST00000120464 466 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm14979-201ENSMUST00000121561 1035 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm15227-201ENSMUST00000121844 399 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm23111-201ENSMUST00000122652 105 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm25898-201ENSMUST00000158303 106 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm9890-201ENSMUST00000171867 537 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Zfp950-206ENSMUST00000178819 171 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm27755-201ENSMUST00000184623 132 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Mrgpra14-201ENSMUST00000189782 913 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm20940-201ENSMUST00000197308 360 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm45034-201ENSMUST00000206831 482 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 AC153553.1-201ENSMUST00000218257 684 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 AC160970.1-201ENSMUST00000219311 475 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 AC156798.1-201ENSMUST00000220508 224 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 AC154484.1-201ENSMUST00000227311 771 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Brf1Q8CFK2 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms