Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.52□□□□□ -1.53
Atg4aQ8C9S8 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.52□□□□□ -1.53
Atg4aQ8C9S8 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.52□□□□□ -1.53
Atg4aQ8C9S8 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Atg4aQ8C9S8 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm11914-201ENSMUST00000117094 507 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm12073-201ENSMUST00000117382 524 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm12112-201ENSMUST00000117772 231 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Mir1903-201ENSMUST00000122574 80 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm29484-201ENSMUST00000186067 324 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm45246-201ENSMUST00000210820 367 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm18043-201ENSMUST00000216741 739 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm22971-201ENSMUST00000083305 97 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr1160-201ENSMUST00000099839 960 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Atg4aQ8C9S8 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm15779-201ENSMUST00000117470 412 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm12520-201ENSMUST00000117493 316 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm12760-201ENSMUST00000117861 482 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm12005-201ENSMUST00000121451 379 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm13220-201ENSMUST00000121535 508 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm13232-201ENSMUST00000121816 632 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm27457-201ENSMUST00000184771 156 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm37070-201ENSMUST00000193272 460 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm42428-201ENSMUST00000198677 302 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm34224-201ENSMUST00000204606 364 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm16415-201ENSMUST00000080097 489 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm10916-201ENSMUST00000080330 483 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Atg4aQ8C9S8 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Mir105-201ENSMUST00000104655 80 ntBASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Gm12237-201ENSMUST00000120158 470 ntBASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Gm10059-201ENSMUST00000131139 171 ntBASIC5.49□□□□□ -1.53
Atg4aQ8C9S8 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms