Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm11781-201ENSMUST00000118328 472 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm15263-201ENSMUST00000121556 642 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm12693-201ENSMUST00000121965 483 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm24730-201ENSMUST00000158228 117 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm25861-201ENSMUST00000158251 109 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm4045-201ENSMUST00000204076 310 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm44002-201ENSMUST00000205134 594 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm45574-201ENSMUST00000210921 331 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Mir132-201ENSMUST00000083603 66 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Mir323-201ENSMUST00000083683 86 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm25420-201ENSMUST00000104216 127 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm11631-201ENSMUST00000119220 156 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Gm23228-201ENSMUST00000157296 270 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm12340-201ENSMUST00000121617 462 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm24944-201ENSMUST00000158330 128 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm28267-201ENSMUST00000191093 265 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm43044-201ENSMUST00000198091 379 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.03□□□□□ -1.76
Col6a6Q8C6K9 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
Col6a6Q8C6K9 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm14539-201ENSMUST00000117527 174 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm22059-201ENSMUST00000157544 104 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm42579-201ENSMUST00000200512 734 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 AC155266.1-201ENSMUST00000220762 904 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Mir193a-201ENSMUST00000083461 66 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm12335-201ENSMUST00000119738 327 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm4487-201ENSMUST00000150617 442 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm22120-201ENSMUST00000175590 70 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm17780-201ENSMUST00000207142 612 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm8137-201ENSMUST00000218997 463 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col6a6Q8C6K9 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms