Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AC154257.2-201ENSMUST00000224166 340 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AC122341.1-201ENSMUST00000227291 560 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm23096-201ENSMUST00000083447 107 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm3867-201ENSMUST00000086108 279 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 AC121844.2-201ENSMUST00000219067 2066 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm3616-201ENSMUST00000174430 2514 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm3683-201ENSMUST00000175701 2513 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm23311-201ENSMUST00000104152 134 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm16106-201ENSMUST00000119187 294 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm15300-201ENSMUST00000122324 279 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm12833-201ENSMUST00000136112 477 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm24584-201ENSMUST00000157972 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm22286-201ENSMUST00000179708 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm26923-201ENSMUST00000182615 996 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm28527-201ENSMUST00000185210 297 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm7266-201ENSMUST00000187999 405 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm34768-201ENSMUST00000193884 565 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm9057-201ENSMUST00000198791 296 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm7166-201ENSMUST00000199715 303 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm18602-201ENSMUST00000209794 851 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 AC138290.2-201ENSMUST00000218822 369 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm22749-201ENSMUST00000082490 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm25133-201ENSMUST00000082647 130 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm24856-201ENSMUST00000082809 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm25258-201ENSMUST00000083049 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm24535-201ENSMUST00000083140 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm22352-201ENSMUST00000083917 107 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim47Q8C0E3 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim47Q8C0E3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm11784-201ENSMUST00000118568 474 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm25782-201ENSMUST00000122526 289 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm26346-201ENSMUST00000157525 329 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm23545-201ENSMUST00000158205 104 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.96□□□□□ -1.3
Trim47Q8C0E3 Gm25525-201ENSMUST00000177701 107 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms