Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Ccdc40Q8BI79 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc40Q8BI79 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc40Q8BI79 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Ccdc40Q8BI79 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm14854-201ENSMUST00000117758 841 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm11550-201ENSMUST00000118210 699 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm15012-201ENSMUST00000119176 106 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm14991-201ENSMUST00000119913 598 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm22378-201ENSMUST00000157481 111 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm22895-201ENSMUST00000157508 308 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm22588-201ENSMUST00000157510 140 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm25433-201ENSMUST00000158283 286 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm43408-201ENSMUST00000198263 440 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm2011-203ENSMUST00000203750 435 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm45498-201ENSMUST00000210346 283 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm6056-201ENSMUST00000221253 488 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm23677-201ENSMUST00000083156 104 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Zfp850-201ENSMUST00000099111 941 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.08□□□□□ -1.6
Ccdc40Q8BI79 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm11790-201ENSMUST00000119569 455 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm14125-202ENSMUST00000120921 756 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm15227-201ENSMUST00000121844 399 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm22343-201ENSMUST00000122648 286 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Snora81-201ENSMUST00000157310 178 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm23250-201ENSMUST00000157444 267 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm19280-201ENSMUST00000190191 205 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm17953-201ENSMUST00000192061 667 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm8999-201ENSMUST00000204951 969 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm18487-201ENSMUST00000215826 878 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm26163-201ENSMUST00000083792 178 ntBASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ccdc40Q8BI79 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.06□□□□□ -1.6
Ccdc40Q8BI79 AC159476.1-201ENSMUST00000215914 1668 ntBASIC5.06□□□□□ -1.6
Ccdc40Q8BI79 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.06□□□□□ -1.6
Ccdc40Q8BI79 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ccdc40Q8BI79 Gm15074-201ENSMUST00000117603 936 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms