Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Six1Q62231 Gm25096-201ENSMUST00000104043 129 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm15058-201ENSMUST00000117689 458 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm13532-201ENSMUST00000120373 240 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Gm23327-201ENSMUST00000157420 78 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm3531-201ENSMUST00000162698 489 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21241-201ENSMUST00000179551 934 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm26950-201ENSMUST00000182734 498 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm29588-201ENSMUST00000185738 298 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm20819-201ENSMUST00000191091 925 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm20871-201ENSMUST00000191322 931 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm42814-201ENSMUST00000199370 460 ntBASIC4.67□□□□□ -1.66
Six1Q62231 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Six1Q62231 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Six1Q62231 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Mir202-201ENSMUST00000083568 72 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Six1Q62231 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Six1Q62231 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.67□□□□□ -1.66
Six1Q62231 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Six1Q62231 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Six1Q62231 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Six1Q62231 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Six1Q62231 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Six1Q62231 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Six1Q62231 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Six1Q62231 Gm14304-201ENSMUST00000117272 446 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm12105-201ENSMUST00000120846 779 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm13460-201ENSMUST00000121274 353 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm11200-201ENSMUST00000121698 448 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm25179-201ENSMUST00000122632 128 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.66□□□□□ -1.66
Six1Q62231 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.66□□□□□ -1.66
Six1Q62231 Gm23441-201ENSMUST00000157268 127 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm24188-201ENSMUST00000157980 108 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm23546-201ENSMUST00000158211 137 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm23162-201ENSMUST00000175081 121 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.66□□□□□ -1.66
Six1Q62231 Gm29332-201ENSMUST00000190829 227 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm17775-201ENSMUST00000198542 258 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm43015-201ENSMUST00000199087 565 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm42458-201ENSMUST00000201914 369 ntBASIC4.66□□□□□ -1.66
Six1Q62231 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 Gm18127-201ENSMUST00000208479 725 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.66□□□□□ -1.66
Six1Q62231 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.66□□□□□ -1.66
Six1Q62231 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.66□□□□□ -1.66
Six1Q62231 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.66□□□□□ -1.66
Six1Q62231 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Six1Q62231 Snord15b-201ENSMUST00000083032 145 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Six1Q62231 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.66□□□□□ -1.66
Six1Q62231 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms