Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm22243-201ENSMUST00000178754 120 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Mir6993-201ENSMUST00000184912 65 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm28195-201ENSMUST00000186992 372 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm37614-201ENSMUST00000195645 210 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm18487-201ENSMUST00000215826 878 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Snora7a-201ENSMUST00000082629 140 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Shank3Q4ACU6 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm37104-201ENSMUST00000193278 196 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Shank3Q4ACU6 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm15364-201ENSMUST00000119618 585 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm9294-201ENSMUST00000165198 789 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm28267-201ENSMUST00000191093 265 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm38270-201ENSMUST00000192721 407 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm4248-201ENSMUST00000196905 316 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm45359-201ENSMUST00000210635 427 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm17779-201ENSMUST00000213395 394 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm3213-201ENSMUST00000219296 441 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm5548-201ENSMUST00000055878 397 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shank3Q4ACU6 AC121997.2-203ENSMUST00000228613 4192 ntBASIC5.65□□□□□ -1.5
Shank3Q4ACU6 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Malat1-201ENSMUST00000172812 6983 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm15534-201ENSMUST00000137642 562 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm22059-201ENSMUST00000157544 104 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm22011-201ENSMUST00000158790 123 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 Gm27695-201ENSMUST00000184301 91 ntBASIC5.65□□□□□ -1.51
Shank3Q4ACU6 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms