Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm17152-201ENSMUST00000172430 535 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm21070-201ENSMUST00000182425 985 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Mir6414-201ENSMUST00000183685 82 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Mir3620-201ENSMUST00000184710 61 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm8823-201ENSMUST00000193158 433 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm2059-201ENSMUST00000212025 287 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm7312-201ENSMUST00000118798 469 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm21816-201ENSMUST00000179255 360 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm28186-201ENSMUST00000187447 679 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm43828-201ENSMUST00000196890 639 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm17956-201ENSMUST00000199931 838 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm7807-201ENSMUST00000212475 578 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm3338-201ENSMUST00000220982 269 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm6863-201ENSMUST00000052882 636 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm23928-201ENSMUST00000082469 145 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Mir338-201ENSMUST00000083666 98 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3aQ3ULJ3 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm15603-201ENSMUST00000119252 492 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm15745-201ENSMUST00000119807 115 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm22613-201ENSMUST00000122679 292 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm22211-201ENSMUST00000158097 156 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm22536-201ENSMUST00000158171 134 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm21803-201ENSMUST00000188897 693 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm37636-201ENSMUST00000193583 359 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm44234-201ENSMUST00000204246 900 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm5339-201ENSMUST00000210551 1102 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3aQ3ULJ3 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms