Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm14619-201ENSMUST00000120480 168 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm15796-201ENSMUST00000162135 204 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm8221-201ENSMUST00000178052 564 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm29196-201ENSMUST00000189239 618 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm18698-201ENSMUST00000192327 668 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm44474-201ENSMUST00000196525 127 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm18330-201ENSMUST00000199246 547 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm45857-201ENSMUST00000212207 356 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.06□□□□□ -1.76
Nkx3-1P97436 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Nkx3-1P97436 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm43266-201ENSMUST00000201049 1771 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm11631-201ENSMUST00000119220 156 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm18828-202ENSMUST00000181035 310 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm5252-201ENSMUST00000189030 909 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm17951-201ENSMUST00000198536 496 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm8319-201ENSMUST00000205708 641 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Snord22-201ENSMUST00000083153 126 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx3-1P97436 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.05□□□□□ -1.76
Nkx3-1P97436 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx3-1P97436 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Mir761-201ENSMUST00000103245 76 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm13195-201ENSMUST00000117229 261 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm16420-201ENSMUST00000120258 856 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm16250-201ENSMUST00000148974 256 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm24774-201ENSMUST00000157384 134 ntBASIC4.04□□□□□ -1.76
Nkx3-1P97436 Gm24402-201ENSMUST00000157873 91 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms