Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.04□□□□□ -1.92
PrkdcP97313 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm29774-201ENSMUST00000219270 436 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm46190-201ENSMUST00000219650 427 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm42725-201ENSMUST00000199296 4193 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm43577-201ENSMUST00000197090 3344 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Mir3471-2-201ENSMUST00000174896 102 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PrkdcP97313 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm24068-201ENSMUST00000104513 132 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm4410-201ENSMUST00000199349 686 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm42453-201ENSMUST00000200477 409 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm8137-201ENSMUST00000218997 463 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm6027-201ENSMUST00000121467 756 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.04□□□□□ -1.92
PrkdcP97313 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Gm44946-201ENSMUST00000208425 572 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Gm19219-201ENSMUST00000215863 724 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr936-202ENSMUST00000216912 937 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PrkdcP97313 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
PrkdcP97313 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PrkdcP97313 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm13902-201ENSMUST00000120168 605 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm29408-201ENSMUST00000187536 216 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm43855-201ENSMUST00000197462 507 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Gm43028-201ENSMUST00000202561 481 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm23925-201ENSMUST00000082471 132 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm9700-201ENSMUST00000193786 1617 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PrkdcP97313 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm23532-201ENSMUST00000104569 112 ntBASIC3.03□□□□□ -1.92
PrkdcP97313 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PrkdcP97313 Gm12465-201ENSMUST00000118591 300 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms