Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Shmt1P50431 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.69□□□□□ -1.5
Shmt1P50431 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Shmt1P50431 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Shmt1P50431 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shmt1P50431 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Mir669d-2-201ENSMUST00000116854 86 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm11699-201ENSMUST00000119016 401 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm11507-201ENSMUST00000156462 412 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm22160-201ENSMUST00000158405 328 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm16236-201ENSMUST00000159588 379 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm23799-201ENSMUST00000175559 120 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Mir6343-201ENSMUST00000183584 84 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm28683-201ENSMUST00000187134 615 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm28840-205ENSMUST00000189320 615 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm19029-201ENSMUST00000189923 564 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm28835-203ENSMUST00000190062 615 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20885-201ENSMUST00000190192 654 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm29740-201ENSMUST00000193182 655 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm36866-201ENSMUST00000193343 657 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm36047-201ENSMUST00000193659 657 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20857-201ENSMUST00000194766 657 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm20858-201ENSMUST00000195459 657 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm44456-201ENSMUST00000196554 89 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm17935-201ENSMUST00000196649 772 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Mir409-201ENSMUST00000198153 79 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm19617-201ENSMUST00000202977 308 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm44184-201ENSMUST00000204290 132 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm44074-201ENSMUST00000204562 337 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm45215-201ENSMUST00000206407 395 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Gm5338-201ENSMUST00000209530 639 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shmt1P50431 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Shmt1P50431 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.68□□□□□ -1.5
Shmt1P50431 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.68□□□□□ -1.5
Shmt1P50431 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Shmt1P50431 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.67□□□□□ -1.5
Shmt1P50431 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shmt1P50431 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Shmt1P50431 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Shmt1P50431 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shmt1P50431 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Shmt1P50431 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.67□□□□□ -1.5
Shmt1P50431 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms