Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm38032-201ENSMUST00000195052 1589 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Mir760-201ENSMUST00000103257 119 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.5□□□□□ -1.37
Sox18P43680 Gm11908-201ENSMUST00000117755 347 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm14359-201ENSMUST00000118883 424 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm8217-201ENSMUST00000119136 465 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm15187-201ENSMUST00000122329 264 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.5□□□□□ -1.37
Sox18P43680 Gm7846-201ENSMUST00000145844 274 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm24914-201ENSMUST00000157285 313 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Snora47-201ENSMUST00000157483 138 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm22529-201ENSMUST00000158817 123 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Mir5099-201ENSMUST00000175257 74 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm27512-201ENSMUST00000175328 126 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm21959-201ENSMUST00000178439 452 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm8600-201ENSMUST00000186320 905 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm29159-201ENSMUST00000187969 379 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm37757-201ENSMUST00000193072 210 ntBASIC6.5□□□□□ -1.37
Sox18P43680 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm44011-201ENSMUST00000203336 394 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm18467-201ENSMUST00000208805 434 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm6850-201ENSMUST00000210031 530 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC6.5□□□□□ -1.37
Sox18P43680 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.5□□□□□ -1.37
Sox18P43680 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.5□□□□□ -1.37
Sox18P43680 AL669916.5-201ENSMUST00000214874 361 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm18103-201ENSMUST00000216621 779 ntBASIC6.5□□□□□ -1.37
Sox18P43680 AC158641.1-201ENSMUST00000218933 229 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm18409-202ENSMUST00000220105 529 ntBASIC6.5□□□□□ -1.37
Sox18P43680 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.5□□□□□ -1.37
Sox18P43680 AC154552.1-201ENSMUST00000222969 202 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm8412-201ENSMUST00000077493 440 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm23447-201ENSMUST00000082798 163 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Gm16020-201ENSMUST00000084281 210 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox18P43680 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox18P43680 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.5□□□□□ -1.37
Sox18P43680 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox18P43680 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox18P43680 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox18P43680 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox18P43680 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox18P43680 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox18P43680 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Gm23941-201ENSMUST00000101953 107 ntBASIC6.49□□□□□ -1.37
Sox18P43680 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox18P43680 Gm24640-201ENSMUST00000116949 126 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm22626-201ENSMUST00000116990 126 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm12871-201ENSMUST00000118758 438 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm12135-201ENSMUST00000119170 466 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm14240-201ENSMUST00000120353 546 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox18P43680 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox18P43680 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox18P43680 Gm22492-201ENSMUST00000157192 297 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm25425-201ENSMUST00000157611 96 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm26352-201ENSMUST00000158223 125 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox18P43680 Gm6541-201ENSMUST00000165542 561 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm17528-201ENSMUST00000171026 239 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox18P43680 Gm24618-201ENSMUST00000177718 94 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm23953-201ENSMUST00000178214 94 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm24761-201ENSMUST00000179589 127 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm26332-201ENSMUST00000179813 94 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm24488-201ENSMUST00000179934 127 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm25701-201ENSMUST00000179988 127 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm26431-201ENSMUST00000180199 127 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm22863-201ENSMUST00000180265 94 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm28781-201ENSMUST00000185760 696 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm29307-201ENSMUST00000187367 696 ntBASIC6.49□□□□□ -1.37
Sox18P43680 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms