Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm23354-201ENSMUST00000158426 104 ntBASIC6.79□□□□□ -1.32
Col18a1P39061 Gm43436-201ENSMUST00000199308 147 ntBASIC6.79□□□□□ -1.32
Col18a1P39061 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.79□□□□□ -1.32
Col18a1P39061 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm7093-201ENSMUST00000223004 581 ntBASIC6.79□□□□□ -1.32
Col18a1P39061 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col18a1P39061 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col18a1P39061 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.79□□□□□ -1.32
Col18a1P39061 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col18a1P39061 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col18a1P39061 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col18a1P39061 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm25943-201ENSMUST00000103791 90 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Mir466b-7-201ENSMUST00000103804 88 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Mir466b-5-201ENSMUST00000103900 88 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Gm11845-201ENSMUST00000117886 327 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm26159-201ENSMUST00000158968 104 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC6.78□□□□□ -1.32
Col18a1P39061 Mir466b-4-201ENSMUST00000178801 90 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Gm25285-201ENSMUST00000178951 90 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Mir466b-6-201ENSMUST00000180061 90 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Mir466c-2-201ENSMUST00000180211 90 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 AC154305.1-201ENSMUST00000224443 450 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Col18a1P39061 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Apoo-ps-201ENSMUST00000061241 586 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 mt-Tr-201ENSMUST00000082412 68 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col18a1P39061 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Col18a1P39061 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col18a1P39061 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.78□□□□□ -1.32
Col18a1P39061 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Col18a1P39061 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.77□□□□□ -1.32
Col18a1P39061 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col18a1P39061 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm12636-201ENSMUST00000117395 624 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm8569-201ENSMUST00000117630 647 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm13220-201ENSMUST00000121535 508 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm13440-201ENSMUST00000121665 496 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm13214-201ENSMUST00000122137 408 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm24961-201ENSMUST00000157918 184 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm28304-201ENSMUST00000185977 312 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm28688-201ENSMUST00000187301 268 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm29256-201ENSMUST00000189094 312 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm28484-201ENSMUST00000190606 312 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm38221-201ENSMUST00000195146 365 ntBASIC6.77□□□□□ -1.33
Col18a1P39061 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.77□□□□□ -1.33
Col18a1P39061 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col18a1P39061 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.77□□□□□ -1.33
Col18a1P39061 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms