Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm26078-201ENSMUST00000104067 128 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm23311-201ENSMUST00000104152 134 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm6754-201ENSMUST00000117124 913 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm14220-201ENSMUST00000118114 449 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm13578-201ENSMUST00000120849 590 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.81□□□□□ -1.8
Sdc1P18828 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm2389-201ENSMUST00000160487 189 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm29320-201ENSMUST00000185235 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm29179-202ENSMUST00000186138 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm29448-201ENSMUST00000186675 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm29314-201ENSMUST00000186800 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm28253-202ENSMUST00000187971 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Mrgpra14-201ENSMUST00000189782 913 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm29169-201ENSMUST00000189835 615 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm37632-201ENSMUST00000191811 1142 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm37881-201ENSMUST00000193001 421 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm37215-201ENSMUST00000194927 1259 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm43491-201ENSMUST00000197133 784 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm44389-201ENSMUST00000203795 182 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm19908-201ENSMUST00000204684 391 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm44538-201ENSMUST00000205615 348 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm45215-201ENSMUST00000206407 395 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm45367-201ENSMUST00000210171 347 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.81□□□□□ -1.8
Sdc1P18828 AC164426.1-201ENSMUST00000225745 929 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Sdc1P18828 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Gm37099-201ENSMUST00000191902 3451 ntBASIC3.81□□□□□ -1.8
Sdc1P18828 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sdc1P18828 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Sdc1P18828 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sdc1P18828 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm45211-201ENSMUST00000206208 2650 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sdc1P18828 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sdc1P18828 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm23692-201ENSMUST00000101881 160 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm23739-201ENSMUST00000102295 108 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm4596-201ENSMUST00000117197 442 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm12231-201ENSMUST00000119447 695 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm13366-201ENSMUST00000122198 970 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm25456-201ENSMUST00000157952 109 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm25553-201ENSMUST00000158076 79 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm22940-201ENSMUST00000158560 155 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC3.8□□□□□ -1.8
Sdc1P18828 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm2877-201ENSMUST00000178248 1204 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm8324-201ENSMUST00000178911 1204 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm24957-201ENSMUST00000179604 132 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm29663-201ENSMUST00000186962 853 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm37189-201ENSMUST00000192131 298 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sdc1P18828 Ighv5-5-201ENSMUST00000193826 329 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm37235-201ENSMUST00000195171 59 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm36382-201ENSMUST00000198892 541 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm44374-201ENSMUST00000199821 140 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm44132-201ENSMUST00000205142 151 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm45006-201ENSMUST00000206078 690 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC3.8□□□□□ -1.8
Sdc1P18828 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 AC153840.1-201ENSMUST00000219685 313 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 CT009556.1-201ENSMUST00000227282 449 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sdc1P18828 Gm10108-201ENSMUST00000078246 319 ntBASIC3.8□□□□□ -1.8
Sdc1P18828 Mir129-1-201ENSMUST00000083535 73 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms