Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm22816-201ENSMUST00000157450 117 ntBASIC5.31□□□□□ -1.56
Col1a1P11087 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm45539-201ENSMUST00000210313 428 ntBASIC5.31□□□□□ -1.56
Col1a1P11087 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.31□□□□□ -1.56
Col1a1P11087 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col1a1P11087 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.31□□□□□ -1.56
Col1a1P11087 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col1a1P11087 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col1a1P11087 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Gm15799-201ENSMUST00000120899 289 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Col1a1P11087 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Gm5548-201ENSMUST00000055878 397 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col1a1P11087 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Col1a1P11087 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col1a1P11087 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col1a1P11087 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Col1a1P11087 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col1a1P11087 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Col1a1P11087 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm25420-201ENSMUST00000104216 127 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm9003-201ENSMUST00000121810 482 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.29□□□□□ -1.56
Col1a1P11087 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.29□□□□□ -1.56
Col1a1P11087 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm42694-201ENSMUST00000196951 358 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm9057-201ENSMUST00000198791 296 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Gm44002-201ENSMUST00000205134 594 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col1a1P11087 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Gm10705-201ENSMUST00000098980 461 ntBASIC5.29□□□□□ -1.56
Col1a1P11087 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col1a1P11087 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col1a1P11087 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Col1a1P11087 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col1a1P11087 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm15426-201ENSMUST00000117823 556 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Gm13550-201ENSMUST00000118185 525 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm12638-201ENSMUST00000119531 298 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Gm11484-201ENSMUST00000119808 338 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Gm15786-201ENSMUST00000121079 450 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Gm13162-201ENSMUST00000121481 454 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.28□□□□□ -1.56
Col1a1P11087 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.28□□□□□ -1.56
Col1a1P11087 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col1a1P11087 Gm18507-201ENSMUST00000218855 525 ntBASIC5.28□□□□□ -1.56
Col1a1P11087 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms