Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37784-201ENSMUST00000193233 189 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm37119-201ENSMUST00000195691 389 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm45690-201ENSMUST00000210775 246 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm18103-201ENSMUST00000216621 779 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm7530-201ENSMUST00000218466 605 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm10264-201ENSMUST00000220589 429 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm25133-201ENSMUST00000082647 130 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Snora30-201ENSMUST00000083325 130 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm26111-201ENSMUST00000083969 106 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Pcdh1F7BJK1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm12386-201ENSMUST00000117380 688 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm12016-201ENSMUST00000119079 681 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm14574-201ENSMUST00000120644 279 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm2986-201ENSMUST00000121603 382 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm15946-201ENSMUST00000160654 423 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm2619-202ENSMUST00000166777 651 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Trbv10-201ENSMUST00000168322 289 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm4152-201ENSMUST00000172675 259 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm38185-201ENSMUST00000193195 694 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm7624-201ENSMUST00000209702 435 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm8863-201ENSMUST00000216630 926 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm24041-201ENSMUST00000083115 156 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Pcdh1F7BJK1 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms