Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm23322-201ENSMUST00000104464 167 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm13533-201ENSMUST00000121104 177 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm15141-201ENSMUST00000121860 729 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm12087-201ENSMUST00000121878 258 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm9428-201ENSMUST00000127214 769 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm23534-201ENSMUST00000157539 97 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28943-201ENSMUST00000186187 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28736-201ENSMUST00000186257 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm29401-201ENSMUST00000186690 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm29178-204ENSMUST00000186784 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28589-201ENSMUST00000186991 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28936-201ENSMUST00000187153 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm29121-201ENSMUST00000187611 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28243-201ENSMUST00000187801 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28844-202ENSMUST00000187977 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm29058-201ENSMUST00000189510 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28924-201ENSMUST00000190012 241 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm29624-201ENSMUST00000190018 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28780-201ENSMUST00000190223 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28969-211ENSMUST00000190992 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm28990-207ENSMUST00000191219 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm36468-201ENSMUST00000192119 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm31572-201ENSMUST00000193341 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm30175-201ENSMUST00000194173 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm30858-201ENSMUST00000195516 615 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm43037-201ENSMUST00000196808 250 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm44376-201ENSMUST00000197570 128 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm3800-201ENSMUST00000221086 554 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 AC157572.4-201ENSMUST00000228203 549 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Mir99a-201ENSMUST00000083596 65 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Gm12887B1AVM1 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm11550-201ENSMUST00000118210 699 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm3943-201ENSMUST00000118606 718 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm14067-201ENSMUST00000119340 314 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm6062-201ENSMUST00000120462 631 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm11584-201ENSMUST00000120636 325 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm25293-201ENSMUST00000122792 285 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm24507-201ENSMUST00000157683 134 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm24690-201ENSMUST00000157759 97 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm24689-201ENSMUST00000157760 104 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm24751-201ENSMUST00000157844 102 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm23030-201ENSMUST00000158004 273 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm43774-201ENSMUST00000196327 878 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm7825-201ENSMUST00000204046 416 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm45857-201ENSMUST00000212207 356 ntBASIC3.53□□□□□ -1.84
Gm12887B1AVM1 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Gm12887B1AVM1 Gm19936-201ENSMUST00000216414 838 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms