Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm25902-201ENSMUST00000158493 318 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm8715-201ENSMUST00000162728 531 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm25243-201ENSMUST00000174912 207 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm27676-201ENSMUST00000183669 61 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm28069-201ENSMUST00000189926 214 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm43689-201ENSMUST00000195951 427 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm44147-201ENSMUST00000204658 94 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm45026-201ENSMUST00000205292 833 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm45049-201ENSMUST00000207586 591 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm45279-201ENSMUST00000210315 391 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC166358.10-201ENSMUST00000220556 144 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm32526-201ENSMUST00000221878 981 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm26056-201ENSMUST00000083043 104 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Snord38a-201ENSMUST00000083746 71 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Fus-202ENSMUST00000079045 2623 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Trim39Q9ESN2 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Trim39Q9ESN2 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Trim39Q9ESN2 Gm20342-201ENSMUST00000185480 9720 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm25563-201ENSMUST00000104603 74 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm14750-201ENSMUST00000118262 516 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm14631-201ENSMUST00000119067 594 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm12447-201ENSMUST00000119110 470 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm13222-201ENSMUST00000119638 138 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm12876-201ENSMUST00000120975 408 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm22604-201ENSMUST00000157604 311 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm25556-201ENSMUST00000158077 144 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm26352-201ENSMUST00000158223 125 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm23473-201ENSMUST00000158883 116 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm3030-201ENSMUST00000163410 516 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm23810-201ENSMUST00000175150 74 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm23047-201ENSMUST00000177661 94 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm26426-201ENSMUST00000177866 123 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm26060-201ENSMUST00000180094 123 ntBASIC6.02□□□□□ -1.45
Trim39Q9ESN2 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms