Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mir129-2-201ENSMUST00000083577 90 ntBASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Defa-ps18-201ENSMUST00000098889 371 ntBASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.43□□□□□ -1.22
Ube3bQ9ES34 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm3616-201ENSMUST00000174430 2514 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm3683-201ENSMUST00000175701 2513 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm15364-201ENSMUST00000119618 585 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm12693-201ENSMUST00000121965 483 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm24687-201ENSMUST00000157758 241 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm17223-201ENSMUST00000171413 481 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm24863-201ENSMUST00000179499 107 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Zfp-ps-201ENSMUST00000185025 478 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm38291-201ENSMUST00000193671 259 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm43541-201ENSMUST00000197208 581 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm7832-201ENSMUST00000202613 880 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC069561.3-201ENSMUST00000217321 114 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm22169-201ENSMUST00000083229 107 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm37780-201ENSMUST00000194117 1873 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC159308.1-201ENSMUST00000216615 1351 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 AC154734.1-201ENSMUST00000219957 2141 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm43843-201ENSMUST00000202396 1587 ntBASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ube3bQ9ES34 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm7195-201ENSMUST00000190869 1707 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 AC158779.2-201ENSMUST00000227902 1947 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm23739-201ENSMUST00000102295 108 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm15076-201ENSMUST00000117076 474 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm13811-201ENSMUST00000117800 256 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm14901-201ENSMUST00000119001 283 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm13998-201ENSMUST00000120952 335 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm8317-201ENSMUST00000121261 471 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC7.41□□□□□ -1.22
Ube3bQ9ES34 Fth-ps2-201ENSMUST00000168364 516 ntBASIC7.41□□□□□ -1.22
Ube3bQ9ES34 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms